Blast (Basic Local Alignment |
| Online search for other sequences in GenBank and other databases |
with similarities to a user supplied sequence. A brief manual is
available. Supported by NCBI (National Center for Biotechnology
|EMBL Sequence Database|| Database of nucleic acid sequences maintained by the European |
Molecular Biology Laboratory. A manual for using this site is available.
|Baylor College of Medicine|| An integrated collection of greater than 50 programs for sequence data |
analysis, including multiple sequence alignments, pattern searches,
gene structure, and protein structure predictions.
|ORF finder||Program at NCBI to find Open Reading Frames in a sequence.|
|Codon Usage Database||Database of Codon Usage for 5000 organisms.|
|Rebase|| Searchable restriction enzyme database for all commercially available |
|Webcutter||Online restriction mapping tool.|
|Primer||PRIMER3 helps select oligonucleotide primers for PCR reactions.|
|Signal Scan|| Scans DNA sequences for promoters, transcription factor binding |
sites, RNA Polymerase II binding sites.
| Biosequence Comparison |
|Basic manual on how sequence comparison programs work.|
|E.coli STOCKS (CGSC)||Information from the E. coli stock Center Database.|
| ATCC - American Type |
| Extensive information about cell lines, plasmids and bacteria, with |
online order forms.
|ExPASy||Analysis of protein and nucleic acid sequences as well as 2-D PAGE.|
|VectorDB||Database of over 2600 vector DNA sequences.|